package applets.genotype;

/* Copyright © 2007 by Christian Fuchsberger and Lukas Forer info@pedvizapi.org.
 * All rights reserved.
 *
 * This program is free software; you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation; either version 2 of the License.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
 * See the GNU General Public License <http://www.pedvizapi.org/gpl.txt>
 * for more details. 
 */
import java.awt.*;
import java.awt.geom.Point2D;
import java.awt.geom.Rectangle2D;
import java.awt.geom.Rectangle2D.Float;
import javax.swing.*;

import pedviz.algorithms.Sugiyama;
import pedviz.graph.Graph;
import pedviz.graph.Node;
import pedviz.loader.CsvGraphLoader;
import pedviz.loader.RessourceGraphLoader;
import pedviz.view.DefaultEdgeView;
import pedviz.view.DefaultNodeView;
import pedviz.view.GraphView2D;
import pedviz.view.NodeView;
import pedviz.view.rules.*;
import pedviz.view.symbols.*;

public class Genotype extends JApplet {

	public void init() {

		// Step 1
		Graph graph = new Graph();
		RessourceGraphLoader loader = new RessourceGraphLoader(
				getParameter("datasource"), " ");
		loader.setSettings("Id", "Fid", "Mid");
		loader.load(graph);

		// Step 2 - register symbol
		DefaultNodeView nodeview = new DefaultNodeView();
		nodeview.addSymbol(new SymbolGenotypes("GABRB1", "D4S1645"));
		nodeview.addHintAttribute("Id");
		nodeview.setColor(Color.WHITE);

		// In the current version of the pedvizapi you must adapt the spacing
		// between the nodes by hand.
		DefaultEdgeView edgeview = new DefaultEdgeView();
		// edgeview.setGapTop(20);

		Sugiyama s = new Sugiyama(graph, nodeview, edgeview);
		// s.getRubberBands().setVerticalSpacing(40);
		s.run();

		// Step 3
		GraphView2D view = new GraphView2D(s.getLayoutedGraph());
		add(view.getComponent());

		// Step 4
		view.addRule(new ShapeRule("sex", "1", new SymbolSexMale()));
		view.addRule(new ShapeRule("sex", "2", new SymbolSexFemale()));
		view.addRule(new ColorRule("aff", "2", Color.BLACK));
	}
}